Submodule organization
xftsim is organized into a number of submodules, the contents of which are arranged as follows:
submodule |
contents |
tutorials |
|---|---|---|
arch |
Phenogenetic archtectures and components thereof |
|
effect |
Genetic effects |
|
founders |
Creating and importing founder haplotypes |
|
index |
Indices for working with individual-, variant-, and component-level data |
|
io |
Routines for reading and writing data to disk |
|
mate |
Mating regimes and the |
|
ped |
Pedigree data stuctures |
|
reproduce |
Reproduction and transmission of genetic and phenotypic data |
|
sim |
Simulation class for setting up and running experiments |
|
stats |
Statistical estimators |
|
struct |
Basic data structures for working with genotype and phenotype data |
|
utils |
Utility functions and profiling |